STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapCSapC; Similar to Salmonella peptide transport permease protein; Code: V; COG: COG4171. (296 aa)    
Predicted Functional Partners:
sapF
Putative ATP-binding protein of peptide transport system; Code: V; COG: COG4167.
 
 0.999
sapD
Putative ATP-binding protein of peptide transport system; Code: V; COG: COG4170; Belongs to the ABC transporter superfamily.
  
 0.997
sapB
SapB; Similar to Salmonella peptide transport permease protein; Code: V; COG: COG4168.
  
 0.977
sapA
SapA; Similar to Salmonella peptide transport periplasmic protein; Code: E; COG: COG4166.
 
  
 0.974
dppD
Putative ATP-binding component of dipeptide transport system; Code: EP; COG: COG0444; Belongs to the ABC transporter superfamily.
     0.972
oppD
OppD; Similar to Salmonella ATP-binding protein of oligopeptide ABC transport system; Code: EP; COG: COG0444; Belongs to the ABC transporter superfamily.
     0.956
dppF
Putative ATP-binding component of dipeptide transport system; Code: E; COG: COG4608; Belongs to the ABC transporter superfamily.
 
     0.948
nikD
ATP-binding protein of nickel transport system; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
 
     0.944
SDY_1611
Putative ATP-binding component of a transport system; Code: EP; COG: COG1124; Belongs to the ABC transporter superfamily.
     0.914
gsiA
Putative ATP-binding component of a transport system; Part of the ABC transporter complex GsiABCD involved in glutathione import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Glutathione importer (TC 3.A.1.5.11) family.
     0.899
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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