STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yniCPutative phosphatase; Code: R; COG: COG0637. (222 aa)    
Predicted Functional Partners:
yfbT
Putative phosphatase; Code: R; COG: COG0637.
  
  
 0.977
cmtA
PTS system, mannitol-specific enzyme II component, cryptic; Code: G; COG: COG2213.
  
 
  0.901
cmtB
PTS system, mannitol-specific enzyme II component, cryptic; Code: GT; COG: COG1762.
     
  0.900
pdhR
Transcriptional regulator for pyruvate dehydrogenase complex; Code: K; COG: COG2186.
      
 0.785
yieH
Putative phosphatase; Code: R; COG: COG0637.
  
     0.680
ndh
Respiratory NADH dehydrogenase; Code: C; COG: COG1252.
     
 0.595
SDY_1819
Conserved hypothetical protein.
       0.525
SDY_1821
Conserved hypothetical protein; Code: R; COG: COG1988; orf.
       0.491
nagE
PTS system, N-acetylglucosamine-specific enzyme IIABC; Code: G; COG: COG1263.
     
 0.428
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.