STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspCActivates phage shock-protein expression; Code: KT; COG: COG1983. (119 aa)    
Predicted Functional Partners:
pspB
Phage shock protein.
 
 
 0.999
pspA
Phage shock protein; Inner membrane protein; Code: KT; COG: COG1842.
 
 
 0.998
pspD
Phage shock protein.
  
  
 0.984
arcB
Aerobic respiration sensor-response protein; Histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642.
   
 
 0.941
pspF
Psp operon transcriptional activator; Code: KT; COG: COG1221.
 
   
 0.936
evgS
Putative sensor for regulator EvgA; Code: ET; COG: COG0834.
  
 
 0.861
barA
Sensor-regulator; Activates OmpR by phophorylation; Code: T; COG: COG0642.
  
 
 0.859
pspE
Phage shock protein; Code: P; COG: COG0607.
  
  
 0.756
ydaA
Conserved hypothetical protein; Code: T; COG: COG0589; orf.
  
     0.753
ycjF
Conserved hypothetical protein; Code: S; COG: COG3768; orf.
 
   
 0.740
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.