STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY_2322Hypothetical protein. (152 aa)    
Predicted Functional Partners:
ycbM
Putative transport system permease protein; Code: P; COG: COG0600.
  
 0.996
SDY_2321
Hypothetical protein.
     0.994
ycbO
Conserved hypothetical protein; Code: P; COG: COG0715; orf.
  
 0.993
ycbP
Conserved hypothetical protein; Code: R; COG: COG0431; orf.
 
 
 0.975
tauC
Taurine transport system permease protein; Code: P; COG: COG0600.
  
 0.925
ycbE
Putative ATP-binding component of a transport system; Code: P; COG: COG1116.
  
 0.911
tauA
Taurine transport system periplasmic protein; Code: P; COG: COG4521.
 
  
 0.902
entF
ATP-dependent serine activating enzyme; May be part of enterobactin synthase as component F; Code: Q; COG: COG1020.
 
 
 
 0.643
rutA
Conserved hypothetical protein; Catalyzes the pyrimidine ring opening between N-3 and C-4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product which can be spontaneously reduced to ureidoacrylate; Belongs to the NtaA/SnaA/SoxA(DszA) monooxygenase family. RutA subfamily.
  
     0.542
tauB
Taurine ATP-binding component of a transport system; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
    0.517
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.