Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| adiY | fucI | SDY_4097 | SDY_3020 | Putative ARAC-type regulatory protein; Code: K; COG: COG2207. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.404 |
| adiY | fucK | SDY_4097 | SDY_3021 | Putative ARAC-type regulatory protein; Code: K; COG: COG2207. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.468 |
| adiY | fucU | SDY_4097 | SDY_3022 | Putative ARAC-type regulatory protein; Code: K; COG: COG2207. | Protein of fucose operon; Involved in the anomeric conversion of L-fucose. | 0.452 |
| fucI | adiY | SDY_3020 | SDY_4097 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Putative ARAC-type regulatory protein; Code: K; COG: COG2207. | 0.404 |
| fucI | fucK | SDY_3020 | SDY_3021 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.985 |
| fucI | fucR | SDY_3020 | SDY_3023 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Positive regulator of the fuc operon; Code: KG; COG: COG1349. | 0.553 |
| fucI | fucU | SDY_3020 | SDY_3022 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Protein of fucose operon; Involved in the anomeric conversion of L-fucose. | 0.952 |
| fucI | rhaB | SDY_3020 | SDY_3842 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Rhamnulokinase; Code: G; COG: COG1070. | 0.779 |
| fucI | yajF | SDY_3020 | SDY_0345 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Possible NAGC-like transcriptional regulator; Code: KG; COG: COG1940. | 0.805 |
| fucI | yiiL | SDY_3020 | SDY_3845 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.468 |
| fucK | adiY | SDY_3021 | SDY_4097 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | Putative ARAC-type regulatory protein; Code: K; COG: COG2207. | 0.468 |
| fucK | fucI | SDY_3021 | SDY_3020 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.985 |
| fucK | fucR | SDY_3021 | SDY_3023 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | Positive regulator of the fuc operon; Code: KG; COG: COG1349. | 0.930 |
| fucK | fucU | SDY_3021 | SDY_3022 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | Protein of fucose operon; Involved in the anomeric conversion of L-fucose. | 0.980 |
| fucK | yiiL | SDY_3021 | SDY_3845 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.633 |
| fucR | fucI | SDY_3023 | SDY_3020 | Positive regulator of the fuc operon; Code: KG; COG: COG1349. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.553 |
| fucR | fucK | SDY_3023 | SDY_3021 | Positive regulator of the fuc operon; Code: KG; COG: COG1349. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.930 |
| fucR | fucU | SDY_3023 | SDY_3022 | Positive regulator of the fuc operon; Code: KG; COG: COG1349. | Protein of fucose operon; Involved in the anomeric conversion of L-fucose. | 0.921 |
| fucU | adiY | SDY_3022 | SDY_4097 | Protein of fucose operon; Involved in the anomeric conversion of L-fucose. | Putative ARAC-type regulatory protein; Code: K; COG: COG2207. | 0.452 |
| fucU | fucI | SDY_3022 | SDY_3020 | Protein of fucose operon; Involved in the anomeric conversion of L-fucose. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.952 |
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