STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY_3076Putative hydrogenase subunit; Code: C; COG: COG1740. (372 aa)    
Predicted Functional Partners:
hybC
Probable large subunit, hydrogenase-2; Code: C; COG: COG0374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 0.999
hybE
Member of hyb operon.
 
 
 0.989
hybA
Hydrogenase-2 small subunit; Code: C; COG: COG0437.
 
  
 0.972
hybB
Probable cytochrome Ni/Fe component of hydrogenase-2; Code: C; COG: COG5557.
 
  
 0.970
hyaC
Probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; Code: C; COG: COG1969.
 
 
 0.967
hybD
Probable processing element for hydrogenase-2; Code: C; COG: COG0680.
 
  
 0.964
hyaB
Hydrogenase-1 large subunit; Code: C; COG: COG0374.
 
 
 0.954
hyaA
Hydrogenase-1 small subunit; Code: C; COG: COG1740.
  
  
 
0.909
hybF
HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.896
ydbK
Putative oxidoreductase, Fe-S subunit; Code: C; COG: COG0674.
   
  
 0.877
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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