yhgF protein (Shigella dysenteriae) - STRING interaction network

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Score

yhgF

Conserved hypothetical protein; Code: K; COG: COG2183; orf. (740 aa)

Predicted Functional Partners:

rpoA

0.867

ybjW

0.819

rpoB

0.790

rpoZ

0.779

greB

0.513

dnaK

0.449

sseB

0.449

SDY_3153

0.449

yhjN

0.449

Your Current Organism:

Shigella dysenteriae

NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDY_3153	dnaK	SDY_3153	SDY_0013	Conserved hypothetical protein.	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.520
SDY_3153	rpoA	SDY_3153	SDY_3471	Conserved hypothetical protein.	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.654
SDY_3153	rpoB	SDY_3153	SDY_3741	Conserved hypothetical protein.	RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.585
SDY_3153	rpoZ	SDY_3153	SDY_4081	Conserved hypothetical protein.	DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.559
SDY_3153	yhgF	SDY_3153	SDY_3669	Conserved hypothetical protein.	Conserved hypothetical protein; Code: K; COG: COG2183; orf.	0.449
dnaK	SDY_3153	SDY_0013	SDY_3153	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Conserved hypothetical protein.	0.520
dnaK	rpoA	SDY_0013	SDY_3471	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.478
dnaK	sseB	SDY_0013	SDY_2718	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Enhanced serine sensitivity.	0.527
dnaK	yhgF	SDY_0013	SDY_3669	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Conserved hypothetical protein; Code: K; COG: COG2183; orf.	0.449
dnaK	yhjN	SDY_0013	SDY_4552	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Conserved hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.520
greB	rpoA	SDY_3670	SDY_3471	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.808
greB	rpoB	SDY_3670	SDY_3741	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.783
greB	rpoZ	SDY_3670	SDY_4081	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.795
greB	yhgF	SDY_3670	SDY_3669	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	Conserved hypothetical protein; Code: K; COG: COG2183; orf.	0.513
rpoA	SDY_3153	SDY_3471	SDY_3153	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein.	0.654
rpoA	dnaK	SDY_3471	SDY_0013	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Chaperone Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.478
rpoA	greB	SDY_3471	SDY_3670	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.808
rpoA	rpoB	SDY_3471	SDY_3741	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	SDY_3471	SDY_4081	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoA	sseB	SDY_3471	SDY_2718	RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Enhanced serine sensitivity.	0.654