STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecACitrate-dependent iron transport, outer membrane receptor; Code: P; COG: COG4772. (774 aa)    
Predicted Functional Partners:
fecI
Probable RNA polymerase sigma factor; Code: K; COG: COG1595; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.932
fecC
Citrate-dependent iron(III) transport protein cytosolic; Code: P; COG: COG0609; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.773
fepA
Outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D; Code: P; COG: COG4771.
  
   
 0.722
rpe
D-ribulose-5-phosphate 3-epimerase; Code: G; COG: COG0036; Belongs to the ribulose-phosphate 3-epimerase family.
      
 0.705
yfaL
Putative ATP-binding component of a transport system; Code: MU; COG: COG3468.
  
     0.661
fecE
ATP-binding component of citrate-dependent iron(III) transport protein; Code: PH; COG: COG1120.
  
  
 0.658
ypjA
Putative ATP-binding component of a transport system; Code: MU; COG: COG3468.
  
     0.631
yhgE
Putative transport.
  
     0.626
fecD
Citrate-dependent iron transporter membrane-bound protein; Code: P; COG: COG0609; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.611
appA
Phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic.
  
     0.574
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.