Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182UPR0 | A0A182UQA8 | RRM domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.969 |
A0A182UPR0 | A0A182UTB9 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein A. | 0.961 |
A0A182UPR0 | A0A182UYU6 | RRM domain-containing protein. | Uncharacterized protein. | 0.925 |
A0A182UPR0 | A0A182V150 | RRM domain-containing protein. | Sm domain-containing protein. | 0.954 |
A0A182UPR0 | A0A182V1S1 | RRM domain-containing protein. | Sm domain-containing protein. | 0.965 |
A0A182UPR0 | A0A182V4E2 | RRM domain-containing protein. | Uncharacterized protein. | 0.928 |
A0A182UPR0 | A0A182V4V3 | RRM domain-containing protein. | Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.960 |
A0A182UPR0 | A0A182V8G8 | RRM domain-containing protein. | PSP domain-containing protein. | 0.930 |
A0A182UPR0 | A0A182VCP6 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | 0.965 |
A0A182UPR0 | A0A340TB91 | RRM domain-containing protein. | PID domain-containing protein. | 0.970 |
A0A182UQA8 | A0A182UPR0 | Small nuclear ribonucleoprotein G. | RRM domain-containing protein. | 0.969 |
A0A182UQA8 | A0A182UTB9 | Small nuclear ribonucleoprotein G. | U1 small nuclear ribonucleoprotein A. | 0.997 |
A0A182UQA8 | A0A182UYU6 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.912 |
A0A182UQA8 | A0A182V150 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.999 |
A0A182UQA8 | A0A182V1S1 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.999 |
A0A182UQA8 | A0A182V4E2 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.969 |
A0A182UQA8 | A0A182V4V3 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
A0A182UQA8 | A0A182V8G8 | Small nuclear ribonucleoprotein G. | PSP domain-containing protein. | 0.982 |
A0A182UQA8 | A0A182VCP6 | Small nuclear ribonucleoprotein G. | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | 0.996 |
A0A182UQA8 | A0A340TB91 | Small nuclear ribonucleoprotein G. | PID domain-containing protein. | 0.999 |
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