A0A182V0S3 protein (Anopheles merus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182V0S3

Uncharacterized protein. (533 aa)

Predicted Functional Partners:

A0A182UMR0

0.742

A0A182UW56

0.722

A0A182VDY8

0.719

A0A182VKQ3

0.718

A0A182UT62

0.687

A0A182UWM9

0.682

A0A182UMB8

0.680

A0A182V190

0.680

A0A182VB73

0.668

A0A182UXB7

0.661

Your Current Organism:

Anopheles merus

NCBI taxonomy Id: 30066
Other names: A. merus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182UMB8	A0A182UMR0	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991
A0A182UMB8	A0A182UT62	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
A0A182UMB8	A0A182UWM9	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.932
A0A182UMB8	A0A182UXB7	WD_REPEATS_REGION domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.963
A0A182UMB8	A0A182V0S3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
A0A182UMB8	A0A182V190	WD_REPEATS_REGION domain-containing protein.	P53 domain-containing protein.	0.515
A0A182UMB8	A0A182VB73	WD_REPEATS_REGION domain-containing protein.	60S ribosomal protein L40.	0.785
A0A182UMB8	A0A182VDY8	WD_REPEATS_REGION domain-containing protein.	C2H2-type domain-containing protein.	0.997
A0A182UMB8	A0A182VKQ3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.778
A0A182UMR0	A0A182UMB8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991
A0A182UMR0	A0A182UW56	WD_REPEATS_REGION domain-containing protein.	B30.2/SPRY domain-containing protein.	0.429
A0A182UMR0	A0A182UWM9	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.975
A0A182UMR0	A0A182UXB7	WD_REPEATS_REGION domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.823
A0A182UMR0	A0A182V0S3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.742
A0A182UMR0	A0A182VB73	WD_REPEATS_REGION domain-containing protein.	60S ribosomal protein L40.	0.642
A0A182UMR0	A0A182VDY8	WD_REPEATS_REGION domain-containing protein.	C2H2-type domain-containing protein.	0.997
A0A182UT62	A0A182UMB8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A182UT62	A0A182UW56	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.708
A0A182UT62	A0A182UWM9	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.902
A0A182UT62	A0A182UXB7	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.973