Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182UNG0 | A0A182V385 | CHK domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.571 |
A0A182UNG0 | A0A182VM49 | CHK domain-containing protein. | Uncharacterized protein. | 0.965 |
A0A182UP01 | A0A182V385 | ATP synthase subunit gamma. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.591 |
A0A182UP01 | A0A182VEE7 | ATP synthase subunit gamma. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.426 |
A0A182UP01 | A0A182VM49 | ATP synthase subunit gamma. | Uncharacterized protein. | 0.691 |
A0A182UP01 | A0A182VN88 | ATP synthase subunit gamma. | Protein sosie. | 0.426 |
A0A182UPL7 | A0A182VJB1 | Uncharacterized protein. | eRF1_1 domain-containing protein. | 0.846 |
A0A182UPL7 | A0A182VM49 | Uncharacterized protein. | Uncharacterized protein. | 0.964 |
A0A182V385 | A0A182UNG0 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | CHK domain-containing protein. | 0.571 |
A0A182V385 | A0A182UP01 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | ATP synthase subunit gamma. | 0.591 |
A0A182V385 | A0A182VAL3 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | RF_PROK_I domain-containing protein. | 0.571 |
A0A182V385 | A0A182VH50 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.913 |
A0A182V385 | A0A182VM49 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.736 |
A0A182VAL3 | A0A182V385 | RF_PROK_I domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.571 |
A0A182VAL3 | A0A182VM49 | RF_PROK_I domain-containing protein. | Uncharacterized protein. | 0.965 |
A0A182VEE7 | A0A182UP01 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | ATP synthase subunit gamma. | 0.426 |
A0A182VEE7 | A0A182VF43 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Uncharacterized protein. | 0.496 |
A0A182VEE7 | A0A182VM49 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Uncharacterized protein. | 0.736 |
A0A182VF43 | A0A182VEE7 | Uncharacterized protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.496 |
A0A182VF43 | A0A182VH50 | Uncharacterized protein. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.416 |
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