Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CcoP1 | SEI53852.1 | SAMN05216280_11052 | SAMN05216280_100114 | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | 0.456 |
CcoP1 | SEI78238.1 | SAMN05216280_11052 | SAMN05216280_100550 | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.798 |
CcoP1 | SEJ23020.1 | SAMN05216280_11052 | SAMN05216280_101544 | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.496 |
CcoP1 | SEJ66867.1 | SAMN05216280_11052 | SAMN05216280_103515 | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | PQQ-dependent catabolism-associated beta-propeller protein. | 0.496 |
CcoP1 | SEJ95987.1 | SAMN05216280_11052 | SAMN05216280_10728 | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Hypothetical protein. | 0.496 |
CcoP1 | SEK00413.1 | SAMN05216280_11052 | SAMN05216280_10894 | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.930 |
OprC | SEI53852.1 | SAMN05216280_100382 | SAMN05216280_100114 | Iron complex outermembrane recepter protein. | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | 0.549 |
SEI53852.1 | CcoP1 | SAMN05216280_100114 | SAMN05216280_11052 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.456 |
SEI53852.1 | OprC | SAMN05216280_100114 | SAMN05216280_100382 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | Iron complex outermembrane recepter protein. | 0.549 |
SEI53852.1 | SEI78238.1 | SAMN05216280_100114 | SAMN05216280_100550 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.506 |
SEI53852.1 | SEJ23020.1 | SAMN05216280_100114 | SAMN05216280_101544 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.441 |
SEI53852.1 | SEJ38021.1 | SAMN05216280_100114 | SAMN05216280_102047 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | Mechanosensitive ion channel. | 0.408 |
SEI53852.1 | SEJ66867.1 | SAMN05216280_100114 | SAMN05216280_103515 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | PQQ-dependent catabolism-associated beta-propeller protein. | 0.441 |
SEI53852.1 | SEJ95987.1 | SAMN05216280_100114 | SAMN05216280_10728 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | Hypothetical protein. | 0.441 |
SEI53852.1 | SEK00413.1 | SAMN05216280_100114 | SAMN05216280_10894 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.472 |
SEI78238.1 | CcoP1 | SAMN05216280_100550 | SAMN05216280_11052 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.798 |
SEI78238.1 | SEI53852.1 | SAMN05216280_100550 | SAMN05216280_100114 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | 0.506 |
SEI78238.1 | SEK00413.1 | SAMN05216280_100550 | SAMN05216280_10894 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.803 |
SEJ23020.1 | CcoP1 | SAMN05216280_101544 | SAMN05216280_11052 | 40-residue YVTN family beta-propeller repeat-containing protein. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.496 |
SEJ23020.1 | SEI53852.1 | SAMN05216280_101544 | SAMN05216280_100114 | 40-residue YVTN family beta-propeller repeat-containing protein. | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. | 0.441 |
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