Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEJ34985.1 | SEJ35009.1 | SAMN05216280_101947 | SAMN05216280_101948 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEJ34985.1 | SEJ35027.1 | SAMN05216280_101947 | SAMN05216280_101949 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEJ35009.1 | SEJ34985.1 | SAMN05216280_101948 | SAMN05216280_101947 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEJ35009.1 | SEJ35027.1 | SAMN05216280_101948 | SAMN05216280_101949 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEJ35009.1 | SEJ42744.1 | SAMN05216280_101948 | SAMN05216280_102222 | Hypothetical protein. | C-terminal, D2-small domain-containing protein, of ClpB protein. | 0.681 |
SEJ35009.1 | SEK01500.1 | SAMN05216280_101948 | SAMN05216280_10958 | Hypothetical protein. | DNA-J related protein. | 0.820 |
SEJ35009.1 | clpB | SAMN05216280_101948 | SAMN05216280_100311 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.681 |
SEJ35009.1 | dnaJ | SAMN05216280_101948 | SAMN05216280_10525 | Hypothetical protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.820 |
SEJ35009.1 | groEL | SAMN05216280_101948 | SAMN05216280_100358 | Hypothetical protein. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.832 |
SEJ35009.1 | groS | SAMN05216280_101948 | SAMN05216280_100357 | Hypothetical protein. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.785 |
SEJ35009.1 | grpE | SAMN05216280_101948 | SAMN05216280_10523 | Hypothetical protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.883 |
SEJ35009.1 | htpG | SAMN05216280_101948 | SAMN05216280_101855 | Hypothetical protein. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.916 |
SEJ35027.1 | SEJ34985.1 | SAMN05216280_101949 | SAMN05216280_101947 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEJ35027.1 | SEJ35009.1 | SAMN05216280_101949 | SAMN05216280_101948 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEJ42744.1 | SEJ35009.1 | SAMN05216280_102222 | SAMN05216280_101948 | C-terminal, D2-small domain-containing protein, of ClpB protein. | Hypothetical protein. | 0.681 |
SEJ42744.1 | SEK01500.1 | SAMN05216280_102222 | SAMN05216280_10958 | C-terminal, D2-small domain-containing protein, of ClpB protein. | DNA-J related protein. | 0.636 |
SEJ42744.1 | dnaJ | SAMN05216280_102222 | SAMN05216280_10525 | C-terminal, D2-small domain-containing protein, of ClpB protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.654 |
SEJ42744.1 | groEL | SAMN05216280_102222 | SAMN05216280_100358 | C-terminal, D2-small domain-containing protein, of ClpB protein. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.605 |
SEJ42744.1 | groS | SAMN05216280_102222 | SAMN05216280_100357 | C-terminal, D2-small domain-containing protein, of ClpB protein. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.578 |
SEJ42744.1 | grpE | SAMN05216280_102222 | SAMN05216280_10523 | C-terminal, D2-small domain-containing protein, of ClpB protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.771 |
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