STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ39825.1Flagellar protein FliS. (125 aa)    
Predicted Functional Partners:
SEJ39725.1
Flagellin.
 
 
 0.985
SEJ39779.1
Flagellar hook-associated protein 2.
 
 
 0.980
SEJ23862.1
Flagellar hook-associated protein 3 FlgL.
 
 
 0.979
SEJ23833.1
Flagellar hook-associated protein 1 FlgK.
 
 
 0.970
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.958
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
 
 0.957
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.955
FliG
Flagellar motor switch protein FliG.
 
  
 0.954
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.951
SEJ23642.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.950
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 17440 [[Pseudomonas pseudoalcaligenes]], ATCC 8062, CCUG 2087, CCUG 51525 [[Pseudomonas pseudoalcaligenes]], CFBP 2435 [[Pseudomonas pseudoalcaligenes]], CFBP 5589, CIP 59.11, CIP 66.14 [[Pseudomonas pseudoalcaligenes]], DSM 50188 [[Pseudomonas pseudoalcaligenes]], IFO 13583, IFO 14167 [[Pseudomonas pseudoalcaligenes]], JCM 11598, JCM 5968 [[Pseudomonas pseudoalcaligenes]], LMG 2229, LMG:2229, NBRC 13583, NBRC 14167 [[Pseudomonas pseudoalcaligenes]], NCCB 76045 [[Pseudomonas pseudoalcaligenes]], NCIB 6576, NCIMB 6576, NCTC 10692, NCTC 10860 [[Pseudomonas pseudoalcaligenes]], NRRL B-778, P. oleovorans, Pseudomonas pseudoalcaligenes, Pseudomonas pseudoalcaligenes subsp. pseudoalcaligenes, Pseudomonas sp. MGY01
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