Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GltB1 | IorA1 | SAMN05216280_1001122 | SAMN05216280_101556 | Glutamate synthase (NADPH) large subunit. | Indolepyruvate ferredoxin oxidoreductase. | 0.551 |
GltB1 | SEJ46645.1 | SAMN05216280_1001122 | SAMN05216280_102443 | Glutamate synthase (NADPH) large subunit. | Homoserine dehydrogenase. | 0.772 |
GltB1 | SEJ77661.1 | SAMN05216280_1001122 | SAMN05216280_104318 | Glutamate synthase (NADPH) large subunit. | Aspartate/methionine/tyrosine aminotransferase. | 0.517 |
GltB1 | aroA | SAMN05216280_1001122 | SAMN05216280_107713 | Glutamate synthase (NADPH) large subunit. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.593 |
GltB1 | gluQ | SAMN05216280_1001122 | SAMN05216280_104316 | Glutamate synthase (NADPH) large subunit. | glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.470 |
GltB1 | pheA | SAMN05216280_1001122 | SAMN05216280_107710 | Glutamate synthase (NADPH) large subunit. | Chorismate mutase /prephenate dehydratase. | 0.630 |
IorA1 | GltB1 | SAMN05216280_101556 | SAMN05216280_1001122 | Indolepyruvate ferredoxin oxidoreductase. | Glutamate synthase (NADPH) large subunit. | 0.551 |
IorA1 | SEJ77661.1 | SAMN05216280_101556 | SAMN05216280_104318 | Indolepyruvate ferredoxin oxidoreductase. | Aspartate/methionine/tyrosine aminotransferase. | 0.480 |
MdaB | SEJ77661.1 | SAMN05216280_1011113 | SAMN05216280_104318 | Modulator of drug activity B. | Aspartate/methionine/tyrosine aminotransferase. | 0.524 |
NhaC | SEJ77661.1 | SAMN05216280_103817 | SAMN05216280_104318 | Transporter, NhaC family. | Aspartate/methionine/tyrosine aminotransferase. | 0.502 |
SEJ46645.1 | GltB1 | SAMN05216280_102443 | SAMN05216280_1001122 | Homoserine dehydrogenase. | Glutamate synthase (NADPH) large subunit. | 0.772 |
SEJ46645.1 | SEJ77661.1 | SAMN05216280_102443 | SAMN05216280_104318 | Homoserine dehydrogenase. | Aspartate/methionine/tyrosine aminotransferase. | 0.518 |
SEJ46645.1 | aroA | SAMN05216280_102443 | SAMN05216280_107713 | Homoserine dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.748 |
SEJ46645.1 | pheA | SAMN05216280_102443 | SAMN05216280_107710 | Homoserine dehydrogenase. | Chorismate mutase /prephenate dehydratase. | 0.853 |
SEJ77661.1 | GltB1 | SAMN05216280_104318 | SAMN05216280_1001122 | Aspartate/methionine/tyrosine aminotransferase. | Glutamate synthase (NADPH) large subunit. | 0.517 |
SEJ77661.1 | IorA1 | SAMN05216280_104318 | SAMN05216280_101556 | Aspartate/methionine/tyrosine aminotransferase. | Indolepyruvate ferredoxin oxidoreductase. | 0.480 |
SEJ77661.1 | MdaB | SAMN05216280_104318 | SAMN05216280_1011113 | Aspartate/methionine/tyrosine aminotransferase. | Modulator of drug activity B. | 0.524 |
SEJ77661.1 | NhaC | SAMN05216280_104318 | SAMN05216280_103817 | Aspartate/methionine/tyrosine aminotransferase. | Transporter, NhaC family. | 0.502 |
SEJ77661.1 | SEJ46645.1 | SAMN05216280_104318 | SAMN05216280_102443 | Aspartate/methionine/tyrosine aminotransferase. | Homoserine dehydrogenase. | 0.518 |
SEJ77661.1 | aroA | SAMN05216280_104318 | SAMN05216280_107713 | Aspartate/methionine/tyrosine aminotransferase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.495 |
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