STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ80364.1Group II intron reverse transcriptase/maturase. (211 aa)    
Predicted Functional Partners:
SEI93811.1
Group II intron, maturase-specific domain.
 
     0.961
SEK02093.1
Group II intron, maturase-specific domain.
 
     0.907
SEJ06932.1
Group II intron, maturase-specific domain.
 
     0.906
SEJ21978.1
Group II intron, maturase-specific domain.
 
     0.906
SEJ30036.1
Hypothetical protein.
 
     0.906
SEI53573.1
Hypothetical protein.
 
     0.900
SEJ96132.1
Group II intron, maturase-specific domain.
 
     0.891
SEJ74770.1
Hypothetical protein.
 
     0.888
SEJ74277.1
Hypothetical protein.
 
     0.868
SEJ78373.1
Hypothetical protein.
 
     0.856
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 17440 [[Pseudomonas pseudoalcaligenes]], ATCC 8062, CCUG 2087, CCUG 51525 [[Pseudomonas pseudoalcaligenes]], CFBP 2435 [[Pseudomonas pseudoalcaligenes]], CFBP 5589, CIP 59.11, CIP 66.14 [[Pseudomonas pseudoalcaligenes]], DSM 50188 [[Pseudomonas pseudoalcaligenes]], IFO 13583, IFO 14167 [[Pseudomonas pseudoalcaligenes]], JCM 11598, JCM 5968 [[Pseudomonas pseudoalcaligenes]], LMG 2229, LMG:2229, NBRC 13583, NBRC 14167 [[Pseudomonas pseudoalcaligenes]], NCCB 76045 [[Pseudomonas pseudoalcaligenes]], NCIB 6576, NCIMB 6576, NCTC 10692, NCTC 10860 [[Pseudomonas pseudoalcaligenes]], NRRL B-778, P. oleovorans, Pseudomonas pseudoalcaligenes, Pseudomonas pseudoalcaligenes subsp. pseudoalcaligenes, Pseudomonas sp. MGY01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.