STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP81781.1DNA starvation/stationary phase protection protein Dps; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
AOP81879.1
ATP-dependent Clp protease adapter ClpS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.908
copA
Cu+ exporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.740
AOP83641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.733
dnaA
Chromosomal replication initiation protein DnaA; Binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.718
AOP82899.1
DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.711
AOP81431.1
DNA polymerase III subunit gamma/tau; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.697
AOP82434.1
DnaA regulatory inactivator Hda; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.697
AOP81977.1
NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.688
AOP82571.1
Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.676
AOP81343.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.671
Your Current Organism:
Enterobacter hormaechei oharae
NCBI taxonomy Id: 301102
Other names: CIP 108490, DSM 16687, E. hormaechei subsp. oharae, Enterobacter hormaechei subsp. oharae, Enterobacter hormaechei subsp. oharae Hoffmann et al. 2016, strain 314, strain EN-314, strain EN_314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.