STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP84580.1Ribonuclease E activity regulator RraA; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
AOP83539.1
ATP-dependent RNA helicase SrmB; Facilitates an early step in the assembly of the 50S subunit of the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.854
AOP84576.1
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.801
AOP80748.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.760
AOP84428.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.656
AOP80745.1
Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.635
AOP84579.1
Catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
AOP81034.1
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.531
AOP84578.1
HslU--HslV peptidase ATPase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.476
AOP80637.1
ATP-dependent RNA helicase RhlB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.465
AOP84323.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.458
Your Current Organism:
Enterobacter hormaechei oharae
NCBI taxonomy Id: 301102
Other names: CIP 108490, DSM 16687, E. hormaechei subsp. oharae, Enterobacter hormaechei subsp. oharae, Enterobacter hormaechei subsp. oharae Hoffmann et al. 2016, strain 314, strain EN-314, strain EN_314
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