STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_0203Hypothetical protein. (447 aa)    
Predicted Functional Partners:
B4135_0207
Hypothetical protein; Type IV pilin PilA.
 
     0.807
B4135_0209
Type IV pilus biogenesis protein PilM.
 
     0.770
B4135_0206
Type IV fimbrial assembly protein PilC.
 
     0.679
B4135_0204
Hypothetical protein; Type IV fimbrial assembly, ATPase PilB.
 
     0.674
B4135_0205
Twitching motility protein PilT.
 
     0.652
B4135_0145
Hypothetical protein.
  
     0.614
B4135_0200
Hypothetical protein.
       0.523
B4135_2563
Protease production regulatory protein Hpr (ScoC).
  
     0.521
B4135_0201
Hypothetical protein.
       0.516
B4135_0202
Hypothetical protein.
       0.516
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.