STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_0549Glutamate transport ATP-binding protein. (242 aa)    
Predicted Functional Partners:
B4135_0547
Hypothetical protein; Glutamate transport membrane-spanning protein.
 0.999
B4135_0546
Hypothetical protein; Glutamate transport membrane-spanning protein.
 0.998
B4135_2182
Hypothetical protein; ABC transporter membrane-spanning permease - glutamine transport.
 0.998
B4135_0345
Hypothetical protein; Amino acid ABC transporter, permease protein.
 0.991
B4135_0548
Hypothetical protein; Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2); Belongs to the bacterial solute-binding protein 3 family.
 0.963
B4135_2181
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 0.926
B4135_0347
Hypothetical protein; Probable amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 0.909
B4135_2245
Hypothetical protein; Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1); Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.904
B4135_0881
Hypothetical protein; Dipeptide transport system permease protein DppC (TC 3.A.1.5.2).
 
      0.826
B4135_0528
Hypothetical protein; Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1).
 
      0.680
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.