STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_0968Hypothetical protein; 3'-phosphoadenosine 5'-phosphosulfate sulfurtransferase DndC. (625 aa)    
Predicted Functional Partners:
B4135_1518
Hypothetical protein; Possible ATPase involved in DNA repair.
   
 0.787
B4135_1522
DNA sulfur modification protein DndD.
   
 0.786
B4135_0969
Hypothetical protein.
       0.773
B4135_0462
Glutamate synthase [NADPH] small chain.
  
 
  0.594
B4135_3699
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.584
B4135_1120
CoA-disulfide reductase / Disulfide bond regulator.
     
 0.544
B4135_3200
Succinate dehydrogenase flavoprotein subunit.
    
 0.543
B4135_0966
Hypothetical protein.
       0.529
B4135_0967
Hypothetical protein.
       0.529
B4135_2787
FIG01108239: hypothetical protein.
     
 0.525
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.