STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_1466FIG00673825: hypothetical protein. (404 aa)    
Predicted Functional Partners:
B4135_1465
Hypothetical protein.
       0.737
B4135_1464
Hypothetical protein.
       0.600
B4135_0692
Hypothetical protein; Putative glycosyl transferase.
  
     0.504
B4135_1367
Serine/threonine protein phosphatase.
    
 0.480
B4135_4229
UDP-glucose 4-epimerase.
 
 
  0.478
B4135_0697
Hypothetical protein.
 
 
 0.466
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.440
B4135_0461
Glutamate synthase [NADPH] large chain.
      
 0.431
B4135_4239
dTDP-glucose 4,6-dehydratase.
 
 
  0.430
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.419
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.