STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_1581Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. (868 aa)    
Predicted Functional Partners:
B4135_2719
Beta-galactosidase.
 
 
 0.857
B4135_1578
Hypothetical protein; Multiple sugar ABC transporter, substrate-binding protein.
 
     0.840
B4135_1761
Hypothetical protein; ROK.
    
 0.812
B4135_3057
Alpha-galactosidase.
 
 
 0.795
B4135_1529
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.787
B4135_1579
Hypothetical protein; Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.
  
    0.778
B4135_1580
Sugar ABC transporter, permease protein precursor.
       0.777
B4135_2725
Aldose 1-epimerase.
  
 
 0.740
B4135_1386
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.709
B4135_3998
Tagatose-6-phosphate kinase / 1-phosphofructokinase.
   
    0.709
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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