STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_1658Hypothetical protein. (51 aa)    
Predicted Functional Partners:
B4135_1659
Hypothetical protein.
       0.456
B4135_1660
Hypothetical protein.
       0.435
B4135_1661
Hypothetical protein; Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
       0.435
B4135_1662
Hypothetical protein.
       0.435
B4135_1663
Hypothetical protein.
       0.423
B4135_1664
Hypothetical protein.
       0.423
B4135_1657
Hypothetical protein.
       0.419
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.