STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_1663Hypothetical protein. (261 aa)    
Predicted Functional Partners:
B4135_1664
Hypothetical protein.
  
 
 0.984
B4135_1661
Hypothetical protein; Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
  
 
 0.960
B4135_1660
Hypothetical protein.
  
 
 0.956
B4135_1662
Hypothetical protein.
       0.772
B4135_1659
Hypothetical protein.
       0.712
B4135_3953
TPR domain protein.
  
 
 0.676
B4135_3730
Hypothetical protein; Flagellar synthesis regulator FleN.
    
  0.622
B4135_2670
Hypothetical protein; Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
    0.555
B4135_3405
Hypothetical protein; Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
    0.555
B4135_1665
Hypothetical protein.
       0.496
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.