STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypdAThioredoxin reductase. (322 aa)    
Predicted Functional Partners:
B4135_1121
Glutaredoxin and related proteins.
  
 0.962
ahpC
Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.852
B4135_1120
CoA-disulfide reductase / Disulfide bond regulator.
    
 0.833
B4135_0461
Glutamate synthase [NADPH] large chain.
    
 0.832
B4135_0952
Hypothetical protein; Thioredoxin.
 
 
 0.814
bshC
Hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
   
 0.782
B4135_1339
FIG01226173: hypothetical protein; Belongs to the UPF0403 family.
  
   
 0.769
B4135_1906
FIG01226417: hypothetical protein; Belongs to the UPF0403 family.
  
   
 0.767
B4135_0272
Hypothetical protein; Glycosyl transferase, group 1 family protein.
  
     0.734
B4135_0820
Hypothetical protein; Fe-S oxidoreductase.
  
  
  0.727
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.