Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B4135_0257 | B4135_4117 | B4135_0257 | B4135_4117 | Hypothetical protein; FIG056164: rhomboid family serine protease. | Hypothetical protein. | 0.771 |
| B4135_0257 | tatA | B4135_0257 | B4135_2142 | Hypothetical protein; FIG056164: rhomboid family serine protease. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.578 |
| B4135_1291 | tatA | B4135_1291 | B4135_2142 | Rhomboid family protein. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.593 |
| B4135_2141 | tatA | B4135_2141 | B4135_2142 | Hypothetical protein. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.499 |
| B4135_2143 | tatA | B4135_2143 | B4135_2142 | Hypothetical protein. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| B4135_2272 | guaA | B4135_2272 | B4135_4039 | Spore coat protein A. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.794 |
| B4135_2272 | tatA | B4135_2272 | B4135_2142 | Spore coat protein A. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.498 |
| B4135_2272 | tatC | B4135_2272 | B4135_4076 | Spore coat protein A. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.850 |
| B4135_3741 | tatA | B4135_3741 | B4135_2142 | Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.542 |
| B4135_4117 | B4135_0257 | B4135_4117 | B4135_0257 | Hypothetical protein. | Hypothetical protein; FIG056164: rhomboid family serine protease. | 0.771 |
| B4135_4117 | tatA | B4135_4117 | B4135_2142 | Hypothetical protein. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.578 |
| guaA | B4135_2272 | B4135_4039 | B4135_2272 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Spore coat protein A. | 0.794 |
| guaA | tatA | B4135_4039 | B4135_2142 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.960 |
| secD | tatA | B4135_3327 | B4135_2142 | Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.567 |
| secD | tatC | B4135_3327 | B4135_4076 | Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.578 |
| tatA | B4135_0257 | B4135_2142 | B4135_0257 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein; FIG056164: rhomboid family serine protease. | 0.578 |
| tatA | B4135_1291 | B4135_2142 | B4135_1291 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Rhomboid family protein. | 0.593 |
| tatA | B4135_2141 | B4135_2142 | B4135_2141 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein. | 0.499 |
| tatA | B4135_2143 | B4135_2142 | B4135_2143 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein. | 0.504 |
| tatA | B4135_2272 | B4135_2142 | B4135_2272 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Spore coat protein A. | 0.498 |
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