STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_2182Hypothetical protein; ABC transporter membrane-spanning permease - glutamine transport. (255 aa)    
Predicted Functional Partners:
B4135_2181
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 0.999
B4135_2183
Hypothetical protein; YqiZ.
 0.999
B4135_0344
Hypothetical protein; Amino acid ABC transporter, ATP-binding protein.
 0.998
B4135_0549
Glutamate transport ATP-binding protein.
 0.998
B4135_0347
Hypothetical protein; Probable amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 0.993
B4135_0548
Hypothetical protein; Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2); Belongs to the bacterial solute-binding protein 3 family.
 0.983
B4135_0514
ABC transporter ATP-binding protein YvcR.
 
   
  0.780
B4135_1150
Hypothetical protein; Putative ABC transporter ATP-binding protein.
 
   
  0.767
argH
Argininosuccinate lyase.
  
    0.719
B4135_0559
Hypothetical protein; ABC-type transport systems, involved in lipoprotein release, ATPase components.
 
   
  0.716
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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