STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_2342Hypothetical protein; Cytochrome c551. (112 aa)    
Predicted Functional Partners:
B4135_2779
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.999
B4135_0282
Hypothetical protein; Component of the menaquinol-cytochrome c reductase complex.
 
 0.990
B4135_0284
Hypothetical protein; Menaquinone-cytochrome C reductase iron-sulfur subunit.
 
 0.987
B4135_0283
Hypothetical protein; Menaquinone-cytochrome c reductase, cytochrome B subunit.
 
 0.975
B4135_2777
Cytochrome c oxidase polypeptide III.
 
 0.975
B4135_0359
Hypothetical protein; Menaquinone-cytochrome C reductase iron-sulfur subunit.
 
 0.974
B4135_2787
FIG01108239: hypothetical protein.
 
 
 0.956
B4135_1325
Cytochrome c oxidase (B(O/a)3-type) chain I; Belongs to the heme-copper respiratory oxidase family.
 
 0.947
B4135_1326
Cytochrome c oxidase (B(O/a)3-type) chain II.
 
 0.922
B4135_2778
Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.917
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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