STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_2551ABC transporter, permease protein EscB. (404 aa)    
Predicted Functional Partners:
B4135_2552
ABC transporter, ATP-binding protein EcsA.
 
  
 0.927
B4135_3088
Hypothetical protein SA_21.
  
     0.714
B4135_2424
Adenine-specific methyltransferase.
 
     0.705
B4135_1067
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.683
B4135_4101
Hypothetical protein; Putative metallopeptidase (Zinc) SprT family; Belongs to the SprT family.
  
     0.668
B4135_2554
Hypothetical protein.
       0.636
B4135_2550
Hypothetical protein.
       0.628
B4135_2764
Hypothetical Cytosolic Protein.
  
     0.604
B4135_2765
Hypothetical protein; ComK regulator; Belongs to the UPF0342 family.
  
   
 0.596
B4135_2260
Hypothetical DUF1027 domain protein.
  
     0.592
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.