STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_2772Hypothetical protein; Phenylalanyl-tRNA synthetase alpha subunit. (120 aa)    
Predicted Functional Partners:
B4135_0252
FIG00673235: hypothetical protein.
  
    0.781
B4135_0063
Hypothetical protein; KinB signaling pathway activation protein.
  
     0.775
B4135_1220
Hypothetical protein.
  
     0.775
B4135_1829
Hypothetical protein; Alternate gene name: yoxJ.
  
     0.775
B4135_1895
FIG01225754: hypothetical protein.
  
     0.775
B4135_2022
Hypothetical protein; ABC transporter periplasmic binding protein yphF.
  
     0.775
B4135_2227
FIG01225718: hypothetical protein.
  
     0.775
ctaF
Cytochrome c oxidase, subunit IV.
  
     0.775
B4135_2790
Hypothetical protein.
  
     0.775
B4135_0285
FIG013069: hypothetical protein co-occurring with TPR domain protein.
  
     0.774
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.