STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_3026Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids. (536 aa)    
Predicted Functional Partners:
ezrA
Hypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.732
B4135_2424
Adenine-specific methyltransferase.
  
    0.683
B4135_3292
Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family.
  
     0.679
recU
Hypothetical protein; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.671
B4135_4024
Hypothetical protein; Putative pheromone cAM373 precursor lipoprotein CamS.
  
    0.650
B4135_3290
Hypothetical protein; Ortholog of S. aureus MRSA252 (BX571856) SAR1694; Belongs to the UPF0473 family.
  
     0.590
B4135_1255
Hypothetical protein; Putative tRNA-m1A22 methylase.
  
     0.582
B4135_3047
Uncharacterized SAV1743 -like protein; Belongs to the UPF0354 family.
  
     0.580
B4135_3437
Competence protein CoiA.
  
     0.564
B4135_1840
Hypothetical protein; Alternate gene name: yoxG.
  
     0.563
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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