STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_3540FIG01226896: hypothetical protein. (367 aa)    
Predicted Functional Partners:
B4135_3943
Long-chain-fatty-acid--CoA ligase.
   
 0.969
B4135_1932
Hypothetical protein; Oxidoreductase, short-chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.913
B4135_2495
Hypothetical protein; Oxidoreductase, short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      0.893
B4135_3539
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.746
B4135_3538
Hypothetical protein.
       0.632
B4135_0442
Long-chain-fatty-acid--CoA ligase.
 
 
 0.623
B4135_3541
Hypothetical protein.
       0.555
menE
O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
 
 
 0.534
B4135_1641
Long-chain-fatty-acid--CoA ligase.
 
 
 0.530
B4135_2466
Lysophospholipase; Monoglyceride lipase; putative/.
    
  0.465
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.