STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_3593Hypothetical protein; Glycosyltransferase. (301 aa)    
Predicted Functional Partners:
B4135_3592
Hypothetical protein.
 
 
 0.945
B4135_3591
FIG00672966: hypothetical protein.
 
  
 0.882
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.754
B4135_1350
Hypothetical protein.
    
 0.543
B4135_1416
Hypothetical protein; 4,4'-diaponeurosporenoate glycosyltransferase.
 
 
 0.543
B4135_3416
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
    
  0.528
B4135_1008
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.513
B4135_2094
Hypothetical protein; Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.504
B4135_4239
dTDP-glucose 4,6-dehydratase.
 
 0.504
B4135_1478
Hypothetical protein; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
  
 
 0.487
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.