STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_3670Hypothetical protein; FIG009210: peptidase, M16 family. (429 aa)    
Predicted Functional Partners:
B4135_2779
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.999
B4135_3671
Hypothetical protein; FIG001621: Zinc protease.
 
  
 0.987
B4135_0284
Hypothetical protein; Menaquinone-cytochrome C reductase iron-sulfur subunit.
   
 0.942
B4135_0359
Hypothetical protein; Menaquinone-cytochrome C reductase iron-sulfur subunit.
   
 0.942
B4135_0282
Hypothetical protein; Component of the menaquinol-cytochrome c reductase complex.
    
  0.875
B4135_0283
Hypothetical protein; Menaquinone-cytochrome c reductase, cytochrome B subunit.
    
  0.875
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.858
B4135_0126
Conserved protein YhfK.
   
 
 0.853
B4135_0140
Hypothetical protein; NADPH:quinone oxidoreductase 2.
   
 
 0.853
B4135_2777
Cytochrome c oxidase polypeptide III.
   
   0.845
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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