STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_3768Hypothetical protein. (528 aa)    
Predicted Functional Partners:
B4135_1463
Lactocepin (Cell wall-associated serine proteinase).
  
 0.870
B4135_3677
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.834
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.821
B4135_3737
Flagellar biosynthesis protein FliZ.
 
     0.801
B4135_3767
Putative flagellar protein.
       0.800
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.800
B4135_3746
Hypothetical protein.
 
   
 0.799
B4135_3748
Flagellar protein FliJ.
 
     0.797
B4135_3033
Hypothetical protein.
  
     0.772
B4135_3747
Flagellar protein FlbB.
 
     0.765
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.