STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4135_4158Hypothetical protein; Hydrolase, haloacid dehalogenase-like family. (286 aa)    
Predicted Functional Partners:
B4135_3414
Hypothetical protein; FIG002540: Haloacid dehalogenase-like hydrolase.
  
 
 
0.604
B4135_4067
Hypothetical protein.
 
  
 0.546
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.541
B4135_4157
N-acetylglucosamine-6-phosphate deacetylase.
       0.533
B4135_3699
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
   
 0.519
B4135_3411
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
  0.483
B4135_1238
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
   
  0.445
B4135_2946
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
   
 
 0.423
Your Current Organism:
Caldibacillus debilis
NCBI taxonomy Id: 301148
Other names: C. debilis, Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012, DSM 16016, Geobacillus debilis, Geobacillus debilis Banat et al. 2004, LMG 23386, LMG:23386, NCIMB 13995, strain R-35653, strain Tf
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