Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM98163.1 | CUM98176.1 | ERS852420_01943 | ERS852420_01944 | Uncharacterised protein. | Uncharacterised protein. | 0.741 |
CUM98163.1 | CUM98190.1 | ERS852420_01943 | ERS852420_01945 | Uncharacterised protein. | Response regulator of the LytR/AlgR family. | 0.596 |
CUM98176.1 | CUM98163.1 | ERS852420_01944 | ERS852420_01943 | Uncharacterised protein. | Uncharacterised protein. | 0.741 |
CUM98176.1 | CUM98190.1 | ERS852420_01944 | ERS852420_01945 | Uncharacterised protein. | Response regulator of the LytR/AlgR family. | 0.620 |
CUM98190.1 | CUM98163.1 | ERS852420_01945 | ERS852420_01943 | Response regulator of the LytR/AlgR family. | Uncharacterised protein. | 0.596 |
CUM98190.1 | CUM98176.1 | ERS852420_01945 | ERS852420_01944 | Response regulator of the LytR/AlgR family. | Uncharacterised protein. | 0.620 |
CUM98190.1 | divK | ERS852420_01945 | ERS852420_03234 | Response regulator of the LytR/AlgR family. | Polar-differentiation response regulator divK. | 0.456 |
CUM98190.1 | luxQ | ERS852420_01945 | ERS852420_02335 | Response regulator of the LytR/AlgR family. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.422 |
CUM98190.1 | yehU_2 | ERS852420_01945 | ERS852420_00255 | Response regulator of the LytR/AlgR family. | Probable sensor-like histidine kinase YehU. | 0.643 |
divK | CUM98190.1 | ERS852420_03234 | ERS852420_01945 | Polar-differentiation response regulator divK. | Response regulator of the LytR/AlgR family. | 0.456 |
divK | luxQ | ERS852420_03234 | ERS852420_02335 | Polar-differentiation response regulator divK. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.999 |
divK | yehU_2 | ERS852420_03234 | ERS852420_00255 | Polar-differentiation response regulator divK. | Probable sensor-like histidine kinase YehU. | 0.964 |
luxQ | CUM98190.1 | ERS852420_02335 | ERS852420_01945 | Autoinducer 2 sensor kinase/phosphatase luxQ. | Response regulator of the LytR/AlgR family. | 0.422 |
luxQ | divK | ERS852420_02335 | ERS852420_03234 | Autoinducer 2 sensor kinase/phosphatase luxQ. | Polar-differentiation response regulator divK. | 0.999 |
luxQ | yehU_2 | ERS852420_02335 | ERS852420_00255 | Autoinducer 2 sensor kinase/phosphatase luxQ. | Probable sensor-like histidine kinase YehU. | 0.989 |
yehU_2 | CUM98190.1 | ERS852420_00255 | ERS852420_01945 | Probable sensor-like histidine kinase YehU. | Response regulator of the LytR/AlgR family. | 0.643 |
yehU_2 | divK | ERS852420_00255 | ERS852420_03234 | Probable sensor-like histidine kinase YehU. | Polar-differentiation response regulator divK. | 0.964 |
yehU_2 | luxQ | ERS852420_00255 | ERS852420_02335 | Probable sensor-like histidine kinase YehU. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.989 |