Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN04311.1 | CUN04323.1 | ERS852420_02327 | ERS852420_02328 | sortase%2C SrtB family. | Uncharacterised protein. | 0.768 |
CUN04311.1 | CUN04339.1 | ERS852420_02327 | ERS852420_02329 | sortase%2C SrtB family. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.794 |
CUN04311.1 | CUN04351.1 | ERS852420_02327 | ERS852420_02330 | sortase%2C SrtB family. | Uncharacterised protein. | 0.688 |
CUN04311.1 | fliU_2 | ERS852420_02327 | ERS852420_02331 | sortase%2C SrtB family. | Flagellar biosynthetic protein fliU. | 0.688 |
CUN04311.1 | nrdD | ERS852420_02327 | ERS852420_02326 | sortase%2C SrtB family. | Anaerobic ribonucleoside-triphosphate reductase. | 0.817 |
CUN04323.1 | CUN04311.1 | ERS852420_02328 | ERS852420_02327 | Uncharacterised protein. | sortase%2C SrtB family. | 0.768 |
CUN04323.1 | CUN04339.1 | ERS852420_02328 | ERS852420_02329 | Uncharacterised protein. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.773 |
CUN04323.1 | CUN04351.1 | ERS852420_02328 | ERS852420_02330 | Uncharacterised protein. | Uncharacterised protein. | 0.693 |
CUN04323.1 | fliU_2 | ERS852420_02328 | ERS852420_02331 | Uncharacterised protein. | Flagellar biosynthetic protein fliU. | 0.693 |
CUN04323.1 | nrdD | ERS852420_02328 | ERS852420_02326 | Uncharacterised protein. | Anaerobic ribonucleoside-triphosphate reductase. | 0.768 |
CUN04339.1 | CUN04311.1 | ERS852420_02329 | ERS852420_02327 | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | sortase%2C SrtB family. | 0.794 |
CUN04339.1 | CUN04323.1 | ERS852420_02329 | ERS852420_02328 | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Uncharacterised protein. | 0.773 |
CUN04339.1 | CUN04351.1 | ERS852420_02329 | ERS852420_02330 | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Uncharacterised protein. | 0.693 |
CUN04339.1 | fliU_2 | ERS852420_02329 | ERS852420_02331 | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Flagellar biosynthetic protein fliU. | 0.699 |
CUN04339.1 | nrdD | ERS852420_02329 | ERS852420_02326 | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Anaerobic ribonucleoside-triphosphate reductase. | 0.998 |
CUN04351.1 | CUN04311.1 | ERS852420_02330 | ERS852420_02327 | Uncharacterised protein. | sortase%2C SrtB family. | 0.688 |
CUN04351.1 | CUN04323.1 | ERS852420_02330 | ERS852420_02328 | Uncharacterised protein. | Uncharacterised protein. | 0.693 |
CUN04351.1 | CUN04339.1 | ERS852420_02330 | ERS852420_02329 | Uncharacterised protein. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.693 |
CUN04351.1 | fliU_2 | ERS852420_02330 | ERS852420_02331 | Uncharacterised protein. | Flagellar biosynthetic protein fliU. | 0.773 |
CUN04351.1 | nrdD | ERS852420_02330 | ERS852420_02326 | Uncharacterised protein. | Anaerobic ribonucleoside-triphosphate reductase. | 0.688 |
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