STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ40705.1Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (126 aa)    
Predicted Functional Partners:
OLZ40706.1
Gas vesicle protein GvpFL; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.850
OLZ40707.1
Protein gvpK; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.832
OLZ42651.1
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
     
0.828
OLZ40711.1
Protein gvpF; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.677
OLZ40710.1
Protein gvpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.675
OLZ40708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.585
OLZ40709.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.551
gvpA
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
     
 0.482
OLZ40714.1
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.469
OLZ40713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.448
Your Current Organism:
Haloterrigena saccharevitans
NCBI taxonomy Id: 301967
Other names: AS 1.3730, H. saccharevitans, Haloterrigena saccharevitans Xu et al. 2005, Haloterrigena saccharominima, Haloterrigena xinjiangensis, JCM 12889, strain AB14
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