STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ42482.1Metal ion permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
OLZ39234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.639
OLZ40963.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.587
OLZ39204.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
OLZ39361.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
OLZ41715.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
OLZ42590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.427
OLZ39374.1
Sulfur oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.414
OLZ40700.1
Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.403
Your Current Organism:
Haloterrigena saccharevitans
NCBI taxonomy Id: 301967
Other names: AS 1.3730, H. saccharevitans, Haloterrigena saccharevitans Xu et al. 2005, Haloterrigena saccharominima, Haloterrigena xinjiangensis, JCM 12889, strain AB14
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