STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ39207.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)    
Predicted Functional Partners:
OLZ41524.1
Arylsulfotransferase (asst); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
OLZ40981.1
Arylsulfotransferase (asst); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
OLZ39206.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
OLZ41900.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.573
OLZ42001.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
OLZ41568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
OLZ39832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
OLZ39204.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.437
OLZ40232.1
Bacterio-opsin activator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
OLZ40700.1
Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Haloterrigena saccharevitans
NCBI taxonomy Id: 301967
Other names: AS 1.3730, H. saccharevitans, Haloterrigena saccharevitans Xu et al. 2005, Haloterrigena saccharominima, Haloterrigena xinjiangensis, JCM 12889, strain AB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.