STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirCUnannotated protein. (272 aa)    
Predicted Functional Partners:
mtcA1
Unannotated protein.
  
  
 0.753
can
Unannotated protein.
  
  
 0.753
adhE_2
Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.563
pflB
Unannotated protein.
 
  
 0.508
fdhF
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.466
ttrA
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.466
gltA
Unannotated protein.
   
  
 0.456
sumT
Unannotated protein; Belongs to the precorrin methyltransferase family.
 
  
 0.419
A21D_00614
Unannotated protein.
  
     0.410
Your Current Organism:
Virgibacillus dokdonensis
NCBI taxonomy Id: 302167
Other names: DSM 16826, KCTC 3933, Ornithinibacillus sp. NY-1, Ornithinibacillus sp. NY-11, Ornithinibacillus sp. NY-6, V. dokdonensis, Virgibacillus dokdonensis Yoon et al. 2005, strain DSW-10
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.