Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A21D_03402 | argG | GCA_900166595_02294 | GCA_900166595_00478 | Unannotated protein. | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.940 |
A21D_03402 | asd | GCA_900166595_02294 | GCA_900166595_02430 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.448 |
A21D_03402 | asnB | GCA_900166595_02294 | GCA_900166595_01716 | Unannotated protein. | Unannotated protein. | 0.909 |
A21D_03402 | asnO | GCA_900166595_02294 | GCA_900166595_03146 | Unannotated protein. | Unannotated protein. | 0.909 |
A21D_03402 | hom | GCA_900166595_02294 | GCA_900166595_03622 | Unannotated protein. | Unannotated protein. | 0.635 |
A21D_03402 | lysC_2 | GCA_900166595_02294 | GCA_900166595_02429 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.874 |
A21D_03402 | nadB | GCA_900166595_02294 | GCA_900166595_03586 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.832 |
A21D_03402 | purA | GCA_900166595_02294 | GCA_900166595_00280 | Unannotated protein. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.922 |
A21D_03402 | pyrB | GCA_900166595_02294 | GCA_900166595_02553 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.907 |
A21D_03402 | yclM | GCA_900166595_02294 | GCA_900166595_02176 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.851 |
argG | A21D_03402 | GCA_900166595_00478 | GCA_900166595_02294 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein. | 0.940 |
argG | asd | GCA_900166595_00478 | GCA_900166595_02430 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.576 |
argG | asnB | GCA_900166595_00478 | GCA_900166595_01716 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein. | 0.924 |
argG | asnO | GCA_900166595_00478 | GCA_900166595_03146 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein. | 0.924 |
argG | hom | GCA_900166595_00478 | GCA_900166595_03622 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein. | 0.665 |
argG | lysC_2 | GCA_900166595_00478 | GCA_900166595_02429 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein; Belongs to the aspartokinase family. | 0.855 |
argG | nadB | GCA_900166595_00478 | GCA_900166595_03586 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.915 |
argG | purA | GCA_900166595_00478 | GCA_900166595_00280 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.933 |
argG | pyrB | GCA_900166595_00478 | GCA_900166595_02553 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.912 |
argG | yclM | GCA_900166595_00478 | GCA_900166595_02176 | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Unannotated protein; Belongs to the aspartokinase family. | 0.893 |
page 1 of 5