STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A21D_03776Unannotated protein. (161 aa)    
Predicted Functional Partners:
cccA_1
Unannotated protein.
 
 
 
 0.951
soxA
Unannotated protein.
   
 
 0.791
ccsB
Unannotated protein.
 
     0.777
A21D_00054
Unannotated protein.
 
 
 
 0.776
A21D_02383
Unannotated protein.
  
     0.774
A21D_03780
Unannotated protein.
  
     0.763
A21D_03285
Unannotated protein.
  
     0.758
A21D_03826
Unannotated protein.
  
     0.757
A21D_02400
Unannotated protein.
  
     0.755
A21D_03366
Unannotated protein.
  
     0.755
Your Current Organism:
Virgibacillus dokdonensis
NCBI taxonomy Id: 302167
Other names: DSM 16826, KCTC 3933, Ornithinibacillus sp. NY-1, Ornithinibacillus sp. NY-11, Ornithinibacillus sp. NY-6, V. dokdonensis, Virgibacillus dokdonensis Yoon et al. 2005, strain DSW-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.