STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mroUnannotated protein; Converts alpha-aldose to the beta-anomer. (344 aa)    
Predicted Functional Partners:
galK
Unannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.994
ebgA
Unannotated protein.
 
 
 0.953
glcK_2
Unannotated protein.
 
 
 0.922
glcK_1
Unannotated protein.
  
 
 0.911
galT_2
Unannotated protein.
 
  
 0.863
galT_1
Unannotated protein.
 
  
 0.506
GCA_900166595_03744
Unannotated protein.
  
 0.436
bglF
Unannotated protein.
  
  
 0.414
ptsG_2
Unannotated protein.
  
  
 0.414
pyk
Unannotated protein; Belongs to the pyruvate kinase family.
  
  
 0.401
Your Current Organism:
Virgibacillus dokdonensis
NCBI taxonomy Id: 302167
Other names: DSM 16826, KCTC 3933, Ornithinibacillus sp. NY-1, Ornithinibacillus sp. NY-11, Ornithinibacillus sp. NY-6, V. dokdonensis, Virgibacillus dokdonensis Yoon et al. 2005, strain DSW-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.