Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A21D_00869 | A21D_00870 | GCA_900166595_03732 | GCA_900166595_03731 | Unannotated protein. | Unannotated protein. | 0.973 |
A21D_00869 | GCA_900166595_03733 | GCA_900166595_03732 | GCA_900166595_03733 | Unannotated protein. | Unannotated protein. | 0.667 |
A21D_00870 | A21D_00869 | GCA_900166595_03731 | GCA_900166595_03732 | Unannotated protein. | Unannotated protein. | 0.973 |
A21D_00870 | GCA_900166595_03733 | GCA_900166595_03731 | GCA_900166595_03733 | Unannotated protein. | Unannotated protein. | 0.638 |
GCA_900166595_03733 | A21D_00869 | GCA_900166595_03733 | GCA_900166595_03732 | Unannotated protein. | Unannotated protein. | 0.667 |
GCA_900166595_03733 | A21D_00870 | GCA_900166595_03733 | GCA_900166595_03731 | Unannotated protein. | Unannotated protein. | 0.638 |
GCA_900166595_03733 | GCA_900166595_03752 | GCA_900166595_03733 | GCA_900166595_03752 | Unannotated protein. | Unannotated protein. | 0.798 |
GCA_900166595_03733 | GCA_900166595_03755 | GCA_900166595_03733 | GCA_900166595_03755 | Unannotated protein. | Unannotated protein. | 0.664 |
GCA_900166595_03733 | mnaA | GCA_900166595_03733 | GCA_900166595_03820 | Unannotated protein. | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.686 |
GCA_900166595_03733 | murC | GCA_900166595_03733 | GCA_900166595_01749 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.656 |
GCA_900166595_03733 | murD | GCA_900166595_03733 | GCA_900166595_02576 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.716 |
GCA_900166595_03733 | murE | GCA_900166595_03733 | GCA_900166595_02579 | Unannotated protein. | Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.613 |
GCA_900166595_03733 | murF | GCA_900166595_03733 | GCA_900166595_02578 | Unannotated protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.708 |
GCA_900166595_03733 | pbpB | GCA_900166595_03733 | GCA_900166595_02581 | Unannotated protein. | Unannotated protein. | 0.634 |
GCA_900166595_03752 | GCA_900166595_03733 | GCA_900166595_03752 | GCA_900166595_03733 | Unannotated protein. | Unannotated protein. | 0.798 |
GCA_900166595_03752 | GCA_900166595_03755 | GCA_900166595_03752 | GCA_900166595_03755 | Unannotated protein. | Unannotated protein. | 0.978 |
GCA_900166595_03752 | mnaA | GCA_900166595_03752 | GCA_900166595_03820 | Unannotated protein. | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.713 |
GCA_900166595_03755 | GCA_900166595_03733 | GCA_900166595_03755 | GCA_900166595_03733 | Unannotated protein. | Unannotated protein. | 0.664 |
GCA_900166595_03755 | GCA_900166595_03752 | GCA_900166595_03755 | GCA_900166595_03752 | Unannotated protein. | Unannotated protein. | 0.978 |
mnaA | GCA_900166595_03733 | GCA_900166595_03820 | GCA_900166595_03733 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein. | 0.686 |
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