Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A21D_01644 | arcA_1 | GCA_900166595_00089 | GCA_900166595_03311 | Unannotated protein. | Unannotated protein. | 0.937 |
A21D_01644 | arcA_2 | GCA_900166595_00089 | GCA_900166595_00118 | Unannotated protein. | Unannotated protein. | 0.927 |
A21D_01644 | arcB_1 | GCA_900166595_00089 | GCA_900166595_03310 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.908 |
A21D_01644 | arcB_2 | GCA_900166595_00089 | GCA_900166595_00117 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.908 |
A21D_01644 | argF | GCA_900166595_00089 | GCA_900166595_03625 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.908 |
A21D_01644 | argH1 | GCA_900166595_00089 | GCA_900166595_00847 | Unannotated protein. | Unannotated protein. | 0.900 |
A21D_01644 | nos | GCA_900166595_00089 | GCA_900166595_01331 | Unannotated protein. | Unannotated protein; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 0.914 |
A21D_01644 | rocD | GCA_900166595_00089 | GCA_900166595_01544 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.414 |
A21D_01644 | rocF | GCA_900166595_00089 | GCA_900166595_03998 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.830 |
A21D_01644 | speA | GCA_900166595_00089 | GCA_900166595_00019 | Unannotated protein. | Unannotated protein. | 0.815 |
arcA_1 | A21D_01644 | GCA_900166595_03311 | GCA_900166595_00089 | Unannotated protein. | Unannotated protein. | 0.937 |
arcA_1 | arcA_2 | GCA_900166595_03311 | GCA_900166595_00118 | Unannotated protein. | Unannotated protein. | 0.900 |
arcA_1 | arcB_1 | GCA_900166595_03311 | GCA_900166595_03310 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.991 |
arcA_1 | arcB_2 | GCA_900166595_03311 | GCA_900166595_00117 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.982 |
arcA_1 | argF | GCA_900166595_03311 | GCA_900166595_03625 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.962 |
arcA_1 | argH1 | GCA_900166595_03311 | GCA_900166595_00847 | Unannotated protein. | Unannotated protein. | 0.915 |
arcA_1 | nos | GCA_900166595_03311 | GCA_900166595_01331 | Unannotated protein. | Unannotated protein; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 0.900 |
arcA_1 | rocF | GCA_900166595_03311 | GCA_900166595_03998 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.833 |
arcA_1 | speA | GCA_900166595_03311 | GCA_900166595_00019 | Unannotated protein. | Unannotated protein. | 0.834 |
arcA_2 | A21D_01644 | GCA_900166595_00118 | GCA_900166595_00089 | Unannotated protein. | Unannotated protein. | 0.927 |
page 1 of 5