Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102196069 | LOC102213956 | ENSPNYP00000023291 | ENSPNYP00000022559 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | 0.821 |
LOC102196069 | ids | ENSPNYP00000023291 | ENSPNYP00000000057 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Iduronate 2-sulfatase. | 0.757 |
LOC102196069 | idua | ENSPNYP00000023291 | ENSPNYP00000003986 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Iduronidase alpha-L-. | 0.412 |
LOC102196069 | manba | ENSPNYP00000023291 | ENSPNYP00000012564 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Mannosidase, beta A, lysosomal. | 0.407 |
LOC102213956 | LOC102196069 | ENSPNYP00000022559 | ENSPNYP00000023291 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | 0.821 |
LOC102213956 | ids | ENSPNYP00000022559 | ENSPNYP00000000057 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Iduronate 2-sulfatase. | 0.757 |
LOC102213956 | idua | ENSPNYP00000022559 | ENSPNYP00000003986 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Iduronidase alpha-L-. | 0.412 |
LOC102213956 | manba | ENSPNYP00000022559 | ENSPNYP00000012564 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Mannosidase, beta A, lysosomal. | 0.407 |
hpse | hpse2 | ENSPNYP00000013910 | ENSPNYP00000010814 | Heparanase. | Heparanase 2. | 0.853 |
hpse | ids | ENSPNYP00000013910 | ENSPNYP00000000057 | Heparanase. | Iduronate 2-sulfatase. | 0.856 |
hpse2 | hpse | ENSPNYP00000010814 | ENSPNYP00000013910 | Heparanase 2. | Heparanase. | 0.853 |
hpse2 | ids | ENSPNYP00000010814 | ENSPNYP00000000057 | Heparanase 2. | Iduronate 2-sulfatase. | 0.852 |
ids | LOC102196069 | ENSPNYP00000000057 | ENSPNYP00000023291 | Iduronate 2-sulfatase. | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | 0.757 |
ids | LOC102213956 | ENSPNYP00000000057 | ENSPNYP00000022559 | Iduronate 2-sulfatase. | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | 0.757 |
ids | hpse | ENSPNYP00000000057 | ENSPNYP00000013910 | Iduronate 2-sulfatase. | Heparanase. | 0.856 |
ids | hpse2 | ENSPNYP00000000057 | ENSPNYP00000010814 | Iduronate 2-sulfatase. | Heparanase 2. | 0.852 |
ids | idua | ENSPNYP00000000057 | ENSPNYP00000003986 | Iduronate 2-sulfatase. | Iduronidase alpha-L-. | 0.917 |
ids | manba | ENSPNYP00000000057 | ENSPNYP00000012564 | Iduronate 2-sulfatase. | Mannosidase, beta A, lysosomal. | 0.707 |
ids | med14 | ENSPNYP00000000057 | ENSPNYP00000014426 | Iduronate 2-sulfatase. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.723 |
ids | med6 | ENSPNYP00000000057 | ENSPNYP00000029240 | Iduronate 2-sulfatase. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.712 |
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