STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efnb1Ephrin-B1; Belongs to the ephrin family. (329 aa)    
Predicted Functional Partners:
LOC102201399
Uncharacterized protein.
   
 0.880
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.879
ENSPNYP00000019921
Sema domain-containing protein.
   
 0.879
ENSPNYP00000019946
Protein kinase domain-containing protein.
   
 0.879
mst1r
Macrophage stimulating 1 receptor b.
   
 0.879
epha2
Eph receptor A2 a.
   
 0.834
LOC102205091
Eph receptor A4b.
   
 0.828
LOC102204381
Eph receptor B3a.
   
 0.809
ephb3
Uncharacterized protein.
   
 0.809
LOC102206986
Uncharacterized protein.
   
 0.801
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.